"Inflorescence that big" Rob Soreng expains to ??, Steve Renvoize and Elizabeth (Toby) Kellogg. Monocots 3, Clarement, 2003
ELIZABETH ANNE KELLOGG
CURRICULUM VITAE
Department
of Biology, University of Missouri-St. Louis, One University Boulevard, St.
Louis, MO 63121 Tel.: 314-516-6217 FAX: 314-516-6233
Education
Ph.D.,
Harvard University, Biology, 1983
M.S.,
University of Idaho, Ecology, 1977
A.B.,
Harvard University, Biochemistry, 1973
Employment
E.
Desmond Lee and Family Professor of Botanical Studies, University of
Missouri-St. Louis, 1998-present
Program
Officer, Systematic Biology and Biodiversity Inventories cluster, Division of
Environmental Biology, National Science Foundation, 2008-2009
Associate
Professor of Biology, Department of Organismic and Evolutionary Biology,
Harvard University, 1993-1998
Research
Associate, Dept. of Organismic and Evolutionary Biology, Harvard University,
1991-1993
Associate, Arnold Arboretum of Harvard University, 1990-1998
Research
Fellow, Department of Molecular Biology, Massachusetts General Hospital,
1990-1991
Associate,
Harvard University Herbaria, 1986-1990
Faculty,
Harvard Extension School, 1985, 1987, 1989
Lecturer,
Department of Organismic and Evolutionary Biology, Harvard University, 1988
Adjunct
Assistant Professor, Northeastern University, 1986-1988
Post-doctoral
fellow, Flora of the Lesser Antilles, with R. A. Howard, 1983-1986
Grant support
NSF
Doctoral Dissertation Improvement Grant, 2012-2014, to Jinshun Zhong, Evolution of floral
symmetry in Lamiales, $15,000
NSF Plant
Genome, 2010-2013, The genomic effects of selection for herbicide resistance in
green foxtail. Collaborative research,
$894,889 total; $296,756 to UMSL
University
of Missouri Research Board, 2008-2009, Diversity among relatives of
switchgrass, $46,952
NSF Plant
Genome, 2006-2011, GEPR: Genetic mechanisms regulating inflorescence
architecture in maize and other cereals. Multi-investigator grant, $6,021,430
total; $744,177 to UMSL
NSF
Dissertation Improvement Grant, 2004-2006, to Mark Beilstein, Phylogeny and
trichome evolution in the Brassicaceae, $10,111
NSF Plant
Genome, 2003-2006, The plant ontology consortium – multi-investigator grant
-$1,499,313 total; $232,935 to UMSL
NSF
US-Brazil Dissertation Research, 2003-2005, to Alberto Vicentini, Phylogenetic
history and species delimitation in the Neotropical plant genus Pagamea Aubl. (Rubiaceae), $20,091
University
of Missouri-St. Louis Research Award, 2003, Book on grasses of the world,
$3,125
NSF Plant
Genome, 2001-2006, Regulation of inflorescence architecture in maize -multi-investigator
grant, $5,300,000 total; $576,000 to UMSL
NSF
Eukaryotic Genetics, 2001-2005, The genetic basis of morphological differences
between two species of Setaria
(Poaceae), $300,000
NSF
Systematic Biology, 2002-2006, Phylogeny, development, and taxonomy of Setaria and its relatives, $300,000
NSF
Dissertation Improvement Grant, 2000-2003, to Lúcia Lohmann, Morphological and
molecular systematics of Bignonieae (Bignoniaceae), $9,814
University
of Missouri Research Board, 2000-2001, Gynoecial expression of a cell death
gene, TASSELSEED2, $40,400
Novartis
Agricultural Discovery Institute, 1999-2002, A public database of grass hybrids
-$103,980
NSF
Systematic Biology, 1999-2002, Phylogeny and development in the grass tribe
Paniceae, $225,000; REU supplement, 2001, $10,000
NSF
Systematic Biology, 1995-1998, Phylogeny and development in the grass tribe
Andropogoneae, $190,000; REU Supplement, 1996, $5000; REU Supplement, 1997,
$10,000
Milton
Fund of Harvard University, 1996-1997, The role of Tasselseed2 in sex expression in plants, $12,000
NSF
Dissertation Improvement Grant, 1996-1997, to Elizabeth Farnsworth, Evolution
of mangrove seed physiology, $9,659
Tozier
Fund, Harvard University, 1994, Molecular evolution and systematics of the
grass family, $3000
NSF
Systematic Biology, 1991-1994, Phylogeny and molecular evolution of the wheat
tribe (Triticeae), $240,000.
W. F.
Milton Fund, 1989, A molecular phylogeny of the Triticeae (Gramineae), $5990.
(J. A. Birchler, PI)
NSF
Dissertation Improvement Grant, 1980-1982, A biosystematic study of the Poa secunda complex, $4197.
Stillinger
Foundation Research Grant, University of Idaho, 1978, $1785.
Sigma Xi
Grant-in-Aid of Graduate Student Research, 1976, $100.
Fellowships and honors
William
Starling Sullivant Award, American Bryological and Lichenological Society,
2011, for “a distinguished, original research article in bryology, published in
The Bryologist”, Camara and Kellogg
(2010)
Académica
(Fellow), Academia Nacional de Ciencias (National Academy of Sciences),
Argentina, 2007
Chancellor’s
Award for Research and Creativity, University of Missouri-St. Louis, 2005
Fellow, American
Association for the Advancement of Science, 2004
Guggenheim
Foundation Fellowship, 2004-2005
Visiting scholar,
Murdoch University, Perth, Western Australia, 2004
Meritorious
Service Award, Students with Disabilities Association, UM-St. Louis, 2004
Honorary
member, Golden Key Honor Society, 2003
Doctor
Honoris Causa, Universidad Nacional de Córdoba, Argentina, 2003
Fellow of
the Academy of Science of St. Louis, 2002
Engler
Medal, International Association of Plant Taxonomists, for Judd et al., 1999
Hoopes
Prize for excellence in undergraduate research, award for supervising thesis of
Benjamin Zaitchik, 1998 ($750)
Bunting
Fellowship, Mary Ingraham Bunting Institute, Cambridge, MA, 1998 ($43,000,
declined)
Phi Beta
Kappa, honorary member, 1997
Eponymy: Phoradendron kelloggiae Kuijt, Novon 7:
42. 1996
Visiting
Scientist, Division of Plant Industry, CSIRO, Canberra, Australia, 1992
Putnam
Fellow, Arnold Arboretum of Harvard University, 1989-1990
Cooley
Award, 1989. For outstanding paper presented at the annual meeting of the
American Society of Plant Taxonomists, Toronto, Ontario
Visiting
Fellow, Plant Molecular Biology Group, Research School of Biological Sciences,
Australian National University, Canberra, 1988, 1992
Parker
Fellow in Biology, 1982-1983. One of 8 students selected from the entire
Graduate School of Arts and Sciences for "high caliber of accomplishment
in ... graduate studies at Harvard."
Editorial boards
Monitoring
editor, Plant Physiology,
2005-present
Board of
Reviewing Editors, Science, 2006-2009
Editorial
board, BMC Evolutionary Biology,
2005-2009
Editorial
Board, International Journal of Plant
Sciences, 1998-present
Editor,
Focus issue on The Grasses, Plant
Physiology, 2007-2008
Editorial
board, Australian Systematic Botany,
2000-2005
Associate
Editor, Molecular Biology and Evolution,
1999-2001
Associate Editor, Systematic
Botany, 1994-1996
Service - Professional societies
Missouri
Botanical Garden Fall Systematics Symposium, organizer, 2010
Maize
Genetics Steering Committee, 2007-2009
Maize
Genetics Nomenclature Committee – 2007-2009
Committee
on Council Affairs, American Association for the Advancement of Science,
2008-2009
Council
Member, American Association for the Advancement of Science, 2008-2010
Webster
Award committee, American Society of Plant Taxonomists, 2006-2007
Council
Member, American Genetics Association, 2006-2008
Past-president,
American Society of Plant Taxonomists, 2005-2006
President,
American Society of Plant Taxonomists, 2004-2005
President-elect,
American Society of Plant Taxonomists, 2003-2004
Past-president,
Society of Systematic Biologists, 2002-2003
President,
Society of Systematic Biologists, 2001-2002
President-elect,
Society of Systematic Biologists, 2000-2001
Honors and
Awards Committee, American Society of Plant Taxonomists, 1998-2000 (chair,
2000)
Council
Member, American Society of Plant Taxonomists, 1999-2001
Nominating
Committee, Society of Systematic Biologists, 1997
Cooley
Award Committee, American Society of Plant Taxonomists, 1994
Secretary,
Society of Systematic Biology, 1991-1994
Nominating
committee, American Society of Plant Taxonomists, 1993
Symposium organizer, Society of Systematic Biology,
1992 -Phylogenetics of model organisms
Research supervision
Supervised 15 post-doctoral fellows, 17
Ph.D. students, 7 M.S. students, 31 undergraduate research assistants
ELIZABETH ANNE KELLOGG
PUBLICATIONS
Publications in refereed journals
1. Coombs,
E. A. K(ellogg), M. J. Donoghue, and R. J. McGinley. 1981. Characters,
computers and cladograms: a review of the Berkeley cladistics workshop.
Systematic Botany 6: 359-372.
2.
Kellogg, E. A. 1985. A biosystematic study of the Poa secunda complex. Journal of the Arnold Arboretum 66: 201-242.
3.
Kellogg, E. A. 1985. Indicator species for assessing overuse of campsites.
Northwest Science 59: 115-121.
4.
Kellogg, E. A., and A. L. Weitzman. 1985. A note on the oceanic species of Melicytus (Violaceae). Journal of the
Arnold Arboretum 66: 491-502.
5.
Kellogg, E. A. 1985. Variation and names in the Poa secunda complex. Journal of Range Management 38: 516-521.
6.
Kellogg, E. A., and R. A. Howard. 1986. The West Indian species of Phoradendron (Viscaceae). Journal of the
Arnold Arboretum 67: 65-107.
7. Howard,
R. A., and E. A. Kellogg. 1986. Nomenclatural notes on Miconia (Melastomataceae). Journal of the Arnold Arboretum 67:
233-255.
8.
Gilmartin, A. J., J. Dobrowolski, D. Soltis, E. Kellogg, and G. Harris. 1986.
Variability within and among populations of four grass species. Systematic
Botany 11: 559-566.
9. Howard,
R. A., and E. A. Kellogg. 1987. Contributions to a flora of Anguilla and
adjacent islets. Journal of the Arnold Arboretum 68: 105-131.
10.
Kellogg, E. A., and R. A. Howard. 1987. Unusual pollen dimorphism in Rondeletia anguillensis. Journal of the Arnold Arboretum 68: 133-136.
11.
Kellogg, E. A. 1987. Apomixis in the Poa
secunda complex. American Journal of Botany 74: 1431-1437.
12.
Kellogg, E. A. 1989. Comments on genomic genera in the Triticeae. American
Journal of Botany 76: 796-805.
13.
Kellogg, E. A. 1990. Variation and species limits in agamospermous grasses. Systematic
Botany 15: 112-123.
14.
Kellogg, E. A. 1990. Ontogenetic studies of florets in Poa (Gramineae): allometry and heterochrony. Evolution 44:
1978-1989.
15.
Bendremer, J. C., E. A. Kellogg, and T. B. Largy. 1991. A grass-lined maize
storage pit and early maize horticulture in central Connecticut. North American
Archaeologist 12: 325-349.
16.
Kellogg, E. A. 1992. Tools for studying the chloroplast genome in the Triticeae
(Gramineae): an EcoRI map, a
diagnostic deletion, and support for Bromus
as an outgroup. American Journal of Botany 79: 186-197.
17.
Kellogg, E. A. 1992. Restriction site variation in the chloroplast genome of
the monogenomic Triticeae. Hereditas
116: 43-47.
18.
Kellogg, E. A., and J. A. Birchler. 1993. Linking phylogeny and genetics: Zea mays as a tool for phylogenetic
studies. Systematic Biology 42: 415-439.
19.
Kellogg, E. A., and H. B. Shaffer. 1993. Model organisms in evolutionary
studies. Systematic Biology 42: 409-414.
20.
Kellogg, E. A. and L. Watson. 1993. Phylogenetic studies of a large data set.
I. Bambusoideae, Pooideae, and Andropogoneae (Gramineae). Botanical Review 59:
273-343.
21.
Cummings, M. P., L. M. King, and E. A. Kellogg. 1994. Slipped-strand mispairing
in a plastid gene: rpoC2 in grasses
(Poaceae). Molecular Biology and
Evolution 11: 1-8.
22.
Hanfstingl, U., A. J. Berry, E. A. Kellogg, J. T. Costa III, W. Rüdiger, and F.
M. Ausubel. 1994. Haplotypic divergence coupled with lack of diversity at the A. thaliana Adh locus: Roles for both
balancing and directional selection. Genetics 138: 811-828.
23.
Kellogg, E. A., and R. Appels. 1995. Intraspecific and interspecific variation
in 5S RNA genes are decoupled in diploid wheat relatives. Genetics 140:
325-343.
24. Kuijt,
J., and E. A. Kellogg. 1996. Miscellaneous mistletoe notes, 20-36. Novon 6:
33-53.
25.
Kellogg, E. A., R. Appels, and R. J. Mason-Gamer. 1996. When genes tell
different stories: the diploid genera of Triticeae (Gramineae). Systematic
Botany 21: 321-347.
26. Sinha,
N. R., and E. A. Kellogg. 1996. Parallelism and diversity in multiple origins
of C4 photosynthesis in the grass family. American Journal of Botany
83: 1458-1470.
27.
Mason-Gamer, R. J., and E. A. Kellogg. 1996. Testing for phylogenetic conflict
among molecular data sets in the Triticeae (Gramineae). Systematic Biology 45:
524-545.
28.
Kellogg, E. A., and N. D. Juliano. 1997. Structure and function of RuBisCO and
their implications for phylogenetic studies. American Journal of Botany 84:
413-428.
29.
Catalan, P., E. A. Kellogg, and R. G. Olmstead. 1997. Phylogeny of Poaceae
subfamily Pooideae based on chloroplast ndhF
gene sequencing. Molecular Phylogenetics and Evolution 8: 150-166.
30.
Bharathan, G., B.-J. Janssen, E. A. Kellogg, and N. R. Sinha. 1997. Homeodomain
proteins duplicated before the origin of angiospermae, fungi, and metazoa.
Proceedings of the National Academy of Sciences, USA. 94: 13749-13753.
31.
Kellogg, E. A. 1998. Who's related to whom? Recent results from molecular
systematic studies. Current Opinion in Plant Biology 1: 149-158.
32.
Kellogg, E. A. 1998. Relationships of cereal crops and other grasses.
Proceedings of the National Academy of Sciences, USA. 95: 2005-2010.
33.
Mason-Gamer, R. J., C. F. Weil, and E. A. Kellogg. 1998. Granule-bound starch
synthase: structure, function, and phylogenetic utility. Molecular Biology and
Evolution 15: 1658-1673.
34.
Angiosperm Phylogeny Group. 1998. An ordinal classification for the families of
flowering plants. Annals of the Missouri
Botanical Garden 85: 531-553.
35. Le
Roux, L. G., and E. A. Kellogg. 1999. Floral development and the formation of
unisexual spikelets in the Andropogoneae (Poaceae). American Journal of Botany
86: 354-366.
36.
Bharathan, G., B.-J. Janssen, E. A. Kellogg, and N. R. Sinha. 1999. Phylogenetic
relationships and evolution of the KNOTTED class of plant homeobox proteins.
Molecular Biology and Evolution. 16: 553-563.
37.
Spangler, R., B. Zaitchik, E. Russo, and E. A. Kellogg. 1999. Andropogoneae
evolution and generic limits in Sorghum
(Poaceae) using ndhF sequences. Systematic Botany 24: 267-281.
38.
Kellogg, E. A., E. J. Farnsworth, E. T. Russo, and F. Bazzaz. 1999. Response of
C4 grasses to elevated CO2. Annals of Botany 84: 279-288.
39.
Mathews, S., R. C. Tsai, and E. A. Kellogg. 2000. Phylogenetic structure in the
grass family: evidence from the nuclear gene phytochrome B. American Journal of
Botany 87: 96-107.
40. Clark,
L. G., M. Kobayashi, S. Mathews, R. E. Spangler, and E. A. Kellogg. 2000. The
Puelioideae, a new subfamily of Poaceae. Systematic Botany 25: 181-187.
41.
Zaitchik, B. F., L. G. leRoux, and E. A. Kellogg. 2000. Development of male
flowers in Zizania aquatica (North American wild-rice;
Gramineae). International Journal of Plant Sciences 161: 345-351.
42. Evans,
R. C., L. A. Alice, C. S. Campbell, E. A. Kellogg, and T. A. Dickinson. 2000.
Multiple putative GBSSI loci in the Rosaceae: characterization and potential
phylogenetic utility. Molecular Phylogenetics and Evolution 11: 388-400.
43.
Kellogg, E. A. 2000. The grasses: a case study in macroevolution. Annual Review
of Ecology and Systematics 31: 217-238.
44.
Kellogg, E. A. 2001. Evolutionary history of the grasses. Plant Physiology 125:
1198-1205.
45. Grass
Phylogeny Working Group. 2001. Phylogeny and subfamilial classification of the
Poaceae. Annals of the Missouri Botanical Garden 88: 373-457.
46.
Giussani, L. M., J. H. Cota, F. O. Zuloaga, and E. A. Kellogg. 2001. A
molecular phylogeny of the grass subfamily Panicoideae (Poaceae) shows multiple
origins of C4 photosynthesis. American Journal of Botany 88:
1993-2012.
47.
Mathews, S., R. J. Mason-Gamer, R. E. Spangler, and E. A. Kellogg. 2002.
Phylogeny of the Andropogoneae inferred from phytochrome B, GBSSI, and ndhF. International Journal of Plant
Sciences 163: 441-450.
48. Doust,
A. N., and E. A. Kellogg. 2002. Inflorescence diversification in the panicoid
"bristle grass" clade (Paniceae, Poaceae): evidence from molecular
phylogenies and developmental morphology.
American Journal of Botany 89: 1203-1222.
49. Chuck,
G., M. Muszynski, E. Kellogg, S. Hake and R. Schmidt. 2002. The control of
spikelet meristem identity by the branched
silkless1 gene in maize. Science 298: 1238-1241.
50.
Aliscioni, S. S., L. M. Giussani, F. O. Zuloaga, and E. A. Kellogg. 2003. A
molecular phylogeny of Panicum
(Poaceae: Paniceae): test of monophyly and phylogenetic placement within the
Panicoideae. American Journal of Botany 90: 796-821.
51.
Razafimandimbison, S. G., E. A. Kellogg, and B. Bremer. 2004. Recent origin and
phylogenetic implications of high-level ITS polymorphisms: a case study from
Naucleae (Rubiaceae). Systematic Biology 53: 177-192.
52. Doust,
A. N., K. M. Devos, M. Gadberry, M. D. Gale, and E. A. Kellogg. 2004. Genetic
control of branching in foxtail millet. Proceedings of the National Academy of
Sciences, USA 101: 9045-9050.
53.
Malcomber, S. T., and E. A. Kellogg. 2004. Heterogeneous expression patterns of
the SEPALLATA-like gene LEAFY HULL
STERILE1 (LHS1) in grasses
(Poaceae) suggests separate roles in meristem determinacy, palea/lemma
identity, and flower sexuality. Plant Cell 16: 1692-1706.
54.
Kellogg, E. A., and J. L. Bennetzen. 2004. The evolution of nuclear genome
structure in plants. American Journal of Botany 91: 1709-1725.
55.
Kellogg, E. A., K. M. Hiser, and A. N. Doust. 2004. Taxonomy, phylogeny, and
inflorescence development of the genus Ixophorus
(Panicoideae: Poaceae). International Journal of Plant Sciences 165: 1089-1105.
56. Kellogg,
E. A. 2004. Evolution of developmental traits. Current Opinion in Plant Biology
7: 92-98.
57.
Jaiswal, P., S. Avraham, K. Ilic, E. A. Kellogg, S. McCouch, A. Pujar, L.
Reiser, S. Y Rhee, M. M. Sachs, M. Schaeffer, L Stein, D. Ware. 2005. Plant
Ontology: a controlled vocabulary of plant structure and growth stages.
Computational and Functional Genomics 6: 388-397.
58.
Gadberry, M. D., S. T. Malcomber, A. N. Doust, and E. A. Kellogg. 2005.
Primaclade -a flexible tool to find primers across multiple species.
Bioinformatics 21: 1263-1264.
59. Doust,
A. N., K. M. Devos, M. Gadberry, M. D. Gale, and E. A. Kellogg. 2005. The
genetic basis for inflorescence variation between foxtail and green millet
(Poaceae). Genetics 169: 1659-1672.
60. Bess,
E. C., A. N. Doust, and E. A. Kellogg. 2005. A naked grass in the “bristle
clade”: a phylogenetic and developmental study of Panicum section Bulbosa (Paniceae: Poaceae). International Journal
of Plant Sciences 166: 371-381.
61.
Rudall, P. J., W. Stuppy, J. Cunniff, E. A. Kellogg, and B. G. Briggs. 2005.
Evolution of reproductive structures in grasses (Poaceae) inferred by
sister-group comparison with their putative closest living relatives,
Ecdeiocoleaceae. American Journal of Botany 92: 1432-1443.
62.
Malcomber, S. T., and E. A. Kellogg. 2005. SEPALLATA gene diversification:
brave new whorls. Trends in Plant Science 10: 427-435.
63.
Kellogg, E. A. 2006. Progress and challenges in studies of the evolution of
development. Journal of Experimental Botany 57: 3505-3516.
64. Doust,
A. N., and E. A. Kellogg. 2006. Genotype-environment interactions for branching
in the weed green millet (Setaria viridis)
and the crop foxtail millet (S. italica)(Poaceae).
Molecular Ecology15: 1335-1349.
65.
Beilstein, M. A., I. A. Al-Shehbaz, and E. A. Kellogg. 2006. Brassicaceae
phylogeny and trichome evolution. American Journal of Botany 93: 607-619.
[Faculty of 1000, Plant Biology, #7 of Top 10 most viewed citations, May 1,
2006.]
66.
Reinheimer, R., S. T. Malcomber, and E. A. Kellogg. 2006. Distinct roles of the
SEPALLATA gene LEAFY HULL STERILE1 in Eleusine indica and Megathyrsus
maximus (Poaceae). Evolution and Development 8: 293-303.
67.
Malcomber, S. T., and E. A. Kellogg. 2006. Evolution of unisexual flowers in
grasses (Poaceae) and the putative sex-determination gene, TASSELSEED2 (TS2). New
Phytologist 170: 885-899.
68.
Preston, J. C. and E. A. Kellogg. 2006. Reconstructing the evolutionary history
of paralogous APETALA1/FRUITFULL-like
genes in grasses (Poaceae). Genetics 174: 421-437.
69.
Al-Shehbaz, I. A., M. A. Beilstein, and E. A. Kellogg. 2006. Systematics and
phylogeny of the Brassicaceae (Cruciferae): an overview. Plant Systematics and
Evolution 259: 89-120.
70. Bess,
E. C., A. N. Doust, G. Davidse, and E. A. Kellogg. 2006. Zuloagaea, new genus of Neotropical grass within the “bristle
clade” (Poaceae: Paniceae). Systematic Botany 31: 656-670.
71. Malcomber,
S. T., J. C. Preston, R. Reinheimer, J. Kossuth, and E. A. Kellogg. 2006.
Developmental gene evolution and the origin of grass inflorescence diversity.
Advances in Botanical Research 44: 425-481.
72. Pujar,
A., P. Jaiswal, E. A. Kellogg, K. Ilic, L. Vincent, S. Avraham, P. Stevens, F.
Zapata, L. Reiser, S. Y. Rhee, M. M. Sachs, M. Schaeffer, L. Stein, D. Ware,
and S. McCouch. 2006. Whole plant growth stage ontology for angiosperms and its
application in plant biology. Plant Physiology142: 414-428.
73.
Kellogg, E. A. 2007. Floral displays: genetic control of grass inflorescences. Current Opinion in Plant Biology 10: 26-31.
74.
Whipple, C. J., M. Zanis, E. A. Kellogg, and R. J. Schmidt. 2007. Conservation
of B class MADS-box gene expression in the second whorl of a basal grass and
outgroups links the origin of lodicules and petals. Proceedings of the National
Academy of Science, USA 104: 1081-1086. [Selected by Faculty of 1000, Plant
Biology, March 9, 2007.]
75. Ilic,
K., E. A. Kellogg, P. Jaiswal, F. Zapata, P. F. Stevens, L. P. Vincent, S.
Avraham, L. Reiser, A. Pujar, M. M. Sachs, N. T. Whitman, S. R. McCouch, M. L.
Schaeffer, D. H. Ware, L. D. Stein, and S. Y. Rhee. 2006. Plant structure
ontology. Unified vocabulary of anatomy and morphology of a flowering plant.
Plant Physiology 143: 587-599.
76. Sánchez-Ken,
J. G., L. G. Clark, E. A. Kellogg, and E. E. Kay. 2007. Reinstatement and
emendation of subfamily Micrairoideae (Poaceae). Systematic Botany 32: 71-80.
77. Doust,
A. N., A. M. Penly, S. W. L. Jacobs, and E. A. Kellogg. 2007. Congruence,
conflict and polyploidization shown by nuclear and chloroplast markers in the
monophyletic “bristle clade” (Paniceae, Panicoideae, Poaceae). Systematic
Botany 32: 531-544.
78.
McSteen, P., S. Malcomber, A. Skirpan, C. Lunde, X. Wu, E. Kellogg, and S.
Hake. 2007. barren inflorescence2
encodes a co-ortholog of the PINOID serine/threonine kinase and is required for
organogenesis during inflorescence and vegetative development in maize. Plant
Physiology 144: 1000-1011.
79. Ortiz,
R. D. C., E. A. Kellogg, and H. Van der Werff. 2007. Molecular phylogeny of the
moonseed family (Menispermaceae). Implications for morphological
diversification. American Journal of Botany 94: 1425-1438.
80.
Preston, J. C., and E. A. Kellogg. 2007. Conservation and divergence of APETALA1/FRUITFULL-like gene function in
grasses: evidence from gene expression analyses. Plant Journal 52: 69-81.
81.
Preston, J. C., and E. A. Kellogg. 2008. Discrete developmental roles for
temperate cereal grass AP1/FUL-like
genes in flowering competency and the transition to flowering. Plant Physiology
146: 265-276.
82.
Avraham, S., C.-W. Tung, K. Ilic, P. Jaiswal, E. A. Kellogg, S. McCouch, A.
Pujar, L. Reiser, S. Y. Rhee, M. M. Sachs, M. Schaeffer, L. Stein, P. Stevens,
L. Vincent, F. Zapata, D. Ware. 2008. The Plant Ontology Database: A community
resource for plant structure and developmental stages controlled vocabulary and
annotations. Nucleic Acids Research 36 (database issue): D449-D454.
83.
Beilstein, M. A., I. A. Al-Shehbaz, S. Mathews, and E. A. Kellogg. 2008.
Brassicaceae phylogeny inferred from phytochrome A and ndhF sequence data: tribes and trichomes revisited. American
Journal of Botany 95: 1307-1327.
84.
Vicentini, A., J. C. Barber, L. M. Giussani, S. S. Aliscioni, and E. A.
Kellogg. 2008. Multiple coincident origins of C4 photosynthesis in
the Mid-to Late Miocene. Global Change Biology 14: 2963-2977. [As of Jan. 2011, this was one of the 25 most
cited articles in the journal.]
85.
Kellogg, E. A., S. S. Aliscioni, O. Morrone, J. Pensiero, and F. Zuloaga. 2009.
A phylogeny of Setaria (Poaceae,
Panicoideae, Paniceae) and related genera, based on the chloroplast gene ndhF. International Journal of Plant Sciences 170: 117-131.
86.
Larson, S. R., and E. A. Kellogg. 2009. Genetic
dissection of seed production traits and identification of a major-effect seed
retention QTL in hybrid Leymus
(Triticeae) wildryes. Crop Science 49: 29-40.
87.
Kellogg, E. A. 2009. The evolutionary history of Ehrhartoideae, Oryzeae, and Oryza. RICE 2: 1-14.
88. Doust,
A. N., E. A. Kellogg, K. M. Devos, and J. L. Bennetzen. 2009. Foxtail millet (Setaria italica): a sequence-driven
grass model system. Plant Physiology 149: 137-141.
89.
Christin, P.-A., N. Salamin, E. A. Kellogg, A. Vicentini, and G. Besnard. 2009.
Integrating phylogeny into studies of C4 variation in the grasses.
Plant Physiology 149: 82-87.
90.
Donadio, S., L. M. Giussani, E. A. Kellogg, F. O. Zuloaga, and O. Morrone. 2009. A molecular phylogeny of Pennisetum and Cenchrus (Poaceae-Paniceae) based on the trnL-F, rpl16 chloroplast
markers. Taxon 58: 392-404.
91. Preston,
J. C., A. Christensen, S. T. Malcomber, and E. A. Kellogg. 2009. MADS-box
gene expression and implications for developmental origins of the grass
spikelet. American Journal of Botany 96: 1419-1429.
92.
Reinheimer, R., and E. A. Kellogg.
2009. Evolution of AGL6-like
genes in grasses (Poaceae) identifies separate roles in meristem and floral
organ identity. Plant Cell 21:
2591-2605.
93. Camara, P. E. A. S., and E. A. Kellogg. 2010.
Morphology and development of leaf papillae in Sematophyllaceae. The Bryologist 113: 22-33. [Paper given the William Starling Sullivant
Award from the American Bryological and Lichenological Society, for “a
distinguished, original research article in bryology, published in The Bryologist.”
94.
Chemisquy, M., L. M. Giussani, M. Scataglini, E. A. Kellogg, and O.
Morrone. 2010. Phylogenetic studies
favor the unification of Pennisetum, Cenchrus and Odontelytrum: a nuclear, chloroplast and morphological combined
analysis. Annals of Botany 106: 107-130.
95. Edwards, E. J., C. P. Osborne, C. A. E.
Strömberg, S. A. Smith, and the C4 grasses consortium. 2010.
The origins of C4 grasslands: integrating evolutionary and
ecosystem science. Science 328: 587-
591.
96.
Gallavotti, A., C. Gaines, S. Stanfield, C. Whipple, E. Kellogg, S. Malcomber,
and R. J. Schmidt. 2011. The BARREN STALK FASTIGIATE1 (BAF1) AT-hook
transcription factor is required for the formation of maize ears. Plant Cell 23: 1756-1771.
97.
Preston, J. C., J. Doebley, H. Wang, and E. A. Kellogg. 2012.
The role of teosinte glume
architecture (tga1) in
coordinated regulation and evolution of grass glumes and inflorescence
axes. New Phytologist 193: 204-215.
98.
Morrone, O., L. Aagesen, M. A. Scataglini, D. L. Salariato, S. S. Denham, M. A.
Chemisquy, S. M. Sede, L. M. Giussani, E. A. Kellogg, and F. O. Zuloaga. 2012. Phylogeny
of the Paniceae (Poaceae: Panicoideae): integrating plastid DNA sequences and
morphology into a new classification. Cladistics: in press.
99. Grass
Phylogeny Working Group II. 2012. New
grass phylogeny resolves deep evolutionary relationships and discovers C4
origins. New Phytologist 193: 304-312.
100. Christin,
P-A., E. J. Edwards, G. Besnard, S. F. Boxall, R. Gregory, E. A. Kellogg, J.
Hartwell, and C. P. Osborne. 2012. Adaptive evolution of C4
photosynthesis through recurrent lateral gene transfer. Current Biology 22: 445-449.
101. Estep, M. C., D. Vela Diaz, J. Zhong, and E.
A. Kellogg. 2012. Eleven diverse nuclear encoded phylogenetic
markers for the subfamily Panicoideae (Poaceae). American Journal of Botany Primer Notes and
Protocols: in press.
102. Morrone,
O., J. Pensiero, S. Aliscioni, E. Kellogg, and F. Zuloaga. A revision of Old
World species of Setaria. Systematic
Botany Monographs: accepted pending revision.
103.
Bennetzen, J. L., J. Schmutz, H. Wang, R. Percifield, J. Hawkins, A. C.
Pontaroli, M. Estep, L. Feng, J. Grimwood, J. Jenkins, K. Barry, E. Lindquist,
U. Hellsten, S. Deshpande, X. Wang, X. Wu, T. Mitros, J. Triplett, X. Yang,
C.-Y. Ye, M. Mauro-Herrara, L. Wang, P. Li,
M. Sharma, R. Sharma, P. C. Ronald, O. Panaud, E. A. Kellogg, T.
Brutnell, A. Doust, G. A. Tuskan, D. Rokhsar,and K. M. Devos. 2012.
Grass genome structure, evolution and adaptation uncovered by sequence
analysis of Setaria. Nature Biotechnology: in press.
104. Triplett, J. K., Y. Wang, J. Zhong and E. A.
Kellogg. Reticulate evolution,
allopolyploidy, and radiation in Panicum:
evidence from multiple nuclear and plastid loci. PLoS ONE: accepted pending minor revision.
Submitted or in manuscript
Bai, F.,
R. Reinheimer, D. Durantini, E. A. Kellogg, and R. J. Schmidt. A TCP transcription factor, BRANCH
ANGLE DEFECTIVE1 (BAD1), is
required for normal tassel branch angle formation in maize. Submitted to Proceedings of the National
Academy of Sciences, USA.
Osborne,
C. P., A. Salomaa, T. A. Kluyver, V. Visser, E. A. Kellog, O Morrone, W. D.
Clayton, D. A. Simpson. A comprehensive
census of C3 and C4 photosynthetic types in grasses
linked to every published scientific name.
Submitted to New Phytologist.
Books, book chapters, and websites
1.
Kellogg, E. A., and C. S. Campbell. 1987. Phylogenetic analyses of the
Gramineae. pp. 310-322. In T. R. Soderstrom, K. W. Hilu, C. S. Campbell, and M.
E. Barkworth, eds. Grass systematics and
evolution. Smithsonian Press, Washington, D.C.
2.
Campbell, C. S., and E. A. Kellogg. 1987. Sister group relationships of the
Poaceae. pp. 217-224. In T. R. Soderstrom, K. W. Hilu, C. S. Campbell, and M.
E. Barkworth, eds. Grass systematics and
evolution. Smithsonian Press, Washington, D.C.
3.
Kellogg, E. A. 1988. Amaranthaceae (pp. 142-173), Basellaceae (pp. 207-210),
Bataceae (pp. 4142), Chenopodiaceae (pp. 139-142), Loranthaceae (pp. 97-101),
Magnoliaceae (pp. 230-232), Nyctaginaceae (pp. 173-186), Phytolaccaceae (pp.
187-194), Ranunculaceae (pp. 220-224), Urticaceae (pp. 70-95), Viscaceae (pp.
102-114), Caesalpinioideae (pp. 377-437). In R. A. Howard, ed. Flora of the Lesser Antilles, Vol. 4.
Arnold Arboretum, Jamaica Plain, MA.
4.
Kellogg, E. A. 1989. Miconia
(Melastomataceae). pp. 551-567. In R. A. Howard, ed. Flora of the Lesser Antilles, Vol. 5. Arnold Arboretum, Jamaica
Plain, MA. (authorship acknowledged in Vol. 6)
5.
Kellogg, E. A. 1994. Systematics of the Triticeae: problems and progress. In R.
R.-C. Wang, K. B. Jensen, and C. Jaussi, eds., Proceedings of the Second International Triticeae Symposium. pp.
207-214.
6. Linder,
H. P., and E. A. Kellogg. 1995. Phylogenetic patterns in the commelinid clade.
In P. J. Rudall, P. J. Cribb, D. F. Cutler, and C. J. Humphries, eds. Monocotyledons: systematics and evolution.
Royal Botanic Gardens, Kew. pp. 473-496.
7.
Kellogg, E. A., and H. P. Linder. 1995. Phylogeny of Poales. In P. J. Rudall,
P. J. Cribb, D. F. Cutler, and C. J. Humphries, eds. Monocotyledons: systematics and evolution. Royal Botanic Gardens,
Kew. pp. 511-542.
8.
Mason-Gamer, R. J., and E. A. Kellogg. 1996. Chloroplast DNA analysis of the
monogenomic Triticeae: Phylogenetic implications and genome-specific markers.
In P. Jauhaur, ed. Methods of genome
analysis in plants: their merits and pitfalls. pp. 301-325.
9.
Kellogg, E. A. 1996. Integrating genetics, phylogenetics, and developmental
biology. In B. W. S. Sobral, ed. The
impact of plant molecular genetics. pp. 159-172.
10.
Kellogg, E. A. 1999. Phylogenetic aspects of the evolution of C4
photosynthesis. Pp. 411-444 in R. Sage and R. Monson, eds. C4 plant biology. Academic Press, New York.
11. Judd,
W. S., C. S. Campbell, E. A. Kellogg, and P. F. Stevens. 1999. Plant Systematics: A phylogenetic approach.
Sinauer Associates: Sunderland, MA.
12. Grass
Phylogeny Working Group. 2000. A phylogeny of the grass family (Poaceae), as
inferred from eight character sets. Pp. 3-7 in S. W. L. Jacobs and J. E.
Everett, eds. Grasses: Systematics and
Evolution. CSIRO, Melbourne.
13.
Kellogg, E. A. 2000. Molecular and morphological evolution in Andropogoneae.
Pp. 149-158 in S. W. L. Jacobs and J. E. Everett, eds. Grasses: Systematics and Evolution. CSIRO, Melbourne.
14.
Mason-Gamer, R. J., and E. A. Kellogg. 2000. Phylogenetic analysis of the
Triticeae using the starch synthase gene, and a preliminary analysis of some
North American Elymus species. Pp.
102-109 in S. W. L. Jacobs and J. E. Everett, eds. Grasses: Systematics and Evolution. CSIRO, Melbourne.
15.
Kellogg, E. A. 2000. A model of inflorescence development. Pp. 84-88 in K. L.
Wilson and D. A. Morrison, eds. Monocots:
systematics and evolution. CSIRO, Melbourne.
16.
Freeling, M, and E. A. Kellogg. 2000. A database of grass hybrids. http://plantbio.berkeley.edu/~freeling/grassweb/
17. Doust,
A.N. and E. A. Kellogg. 2002. Integrating phylogeny, developmental morphology
and genetics: a case study of inflorescence evolution in the ‘bristle grass’
clade (Panicoideae, Poaceae). Pp. 298-314 in Q. C. B. Cronk, R. M. Bateman and
J. A. Hawkins, eds. Developmental
genetics and plant evolution. Taylor and Francis, London.
18. Kellogg, E. A. 2002. Are macroevolution and
microevolution qualitatively different? Evidence from Poaceae and other
families. Pp. 70-84 in Q. C. B. Cronk, R. M. Bateman and J. A. Hawkins, eds. Developmental
genetics and plant evolution. Taylor and Francis, London.
19. Judd,
W. S., C. S. Campbell, E. A. Kellogg, P. F. Stevens, and M. J. Donoghue. 2002. Plant Systematics: A phylogenetic approach.
2nd edition. Sinauer Associates: Sunderland, MA.
20.
Kellogg, E. A. 2002. Classification of the grass family. Flora of Australia 43: 19-36.
21.
Kellogg, E. A. 2003. Schismus. p. 307
in M. E. Barkworth, K. M. Capels, S. Long, and M. B. Piep, eds. Flora of North
America. Vol. 25. Magnoliophyta:
Commelinidae (in part): Poaceae, part 2. Oxford University Press, Oxford.
22. Plant
Ontology. 2004 and onwards. www.plantontology.org
23. Clark,
L. G., and E. A. Kellogg. 2007. Poaceae. [Family description.] pp. 3-6 in M. E.
Barkworth, K. M. Capels, S. Long, and M. B. Piep, eds. Flora of North America. Vol. 24. Magnoliophyta: Commelinidae (in part):
Poaceae, part 1. Oxford University Press, Oxford.
24. Ilic,
K., P. F. Stevens, E. A. Kellogg, and S. Y. Rhee. 2008.
Plant structure ontology - anatomical ontology of flowering plants. Pp. 27-42 in A. Burger, D. Davidson and R.
Baldock, eds. Anatomy ontologies for bioinformatics: Principles and practice. Series: Computational Biology, Vol. 6. ISBN: 978-1-84628-884-5. Springer, New York.
25. Judd,
W. S., C. S. Campbell, E. A. Kellogg, P. F. Stevens, and M. J. Donoghue. 2007. Plant Systematics: A phylogenetic approach.
3rd edition. Sinauer Associates: Sunderland, MA.
26. Kellogg, E. A. 2012.
Phylogenetic relationships in Saccharinae. In. A. Paterson, ed. Genetics and genomics of
the Saccharinae. Springer. In press.
27. E. A.
Kellogg, Poaceae. MS in prep. In K. Kubtizki, ed., The Families and Genera of Vascular Plants. Springer-Verlag.
Book reviews, commentaries, and popular articles
1.
Kellogg, E. A. 1990. Book Review: Genera
graminum (Clayton and Renvoize) and Grass genera of the world (Watson and
Dallwitz). Journal of the Arnold Arboretum 71: 271-273.
2.
Kellogg, E. A. 1991. Why study mistletoes? Arnoldia 51(3): 11-17.
3.
Kellogg, E. A. 1992. The families and
genera of vascular plants (K. Kubitzki, ed.). Quarterly Review of Biology
67: 59-60.
4.
Kellogg, E. A. 1992. The convenience of Arabidopsis. Arnoldia: 52: 12-16.
5.
Kellogg, E. A. 1993. Green plants: Their
origin and diversity (P. Bell). Systematic Biology 42: 221-222.
6. Kellogg,
E. A. 1995. What makes a good monograph? ASPT Newsletter, Oct. 1994, pp. 12-15.
7.
Kellogg, E. A. 1997. Dispatch. Plant evolution: The dominance of maize. Current
Biology 7: R411R413.
8.
Kellogg, E. A. 1997. The biology of
grasses (G. P. Chapman). Quarterly Review of Biology 72: 473474.
9.
Bennetzen, J., and E. A. Kellogg. 1997. Do plants have a one-way ticket to
genomic obesity? Letter to the Editor. Plant Cell 9: 1509-1514.
10.
Bennetzen, J., E. A. Kellogg, M. Lee, and J. Messing. 1998. Protecting our food
supply: the value of plant genome initiatives. Plant Cell 10: 488-493.
11.
Bennetzen, J., E. Buckler, V. Chandler, J. Doebley, J. Dorweiler, B. Gaut, M.
Freeling, S. Hake, E. Kellogg, R. S. Poethig, V. Walbot, and S. Wessler. 2001.
Genetic evidence and the origin of maize. Latin American Antiquity. 12:84-86.
12.
Kellogg, E. A. 2001. Root hairs, trichomes, and the evolution of duplicate
genes. Trends in Plant Sciences 6: 550-552.
13.
Kellogg, E. A. 2001. Grasses, synteny, evolution, and molecular systematics.
pp. 889-890 in Encyclopedia of Genetics,
Academic Press.
14.
Committee on Objectives of the National Plant Genome Initiative: 2003-2008. The
National Plant Genomics Initiative: Objectives for 2003-2008. Report published
September 2002.
15.
Kellogg, E. A. 2003. What happens to duplicated genes in genomes. Proceedings
of the National Academy of Sciences USA 100: 4369-4371.
16.
Kellogg, E. A. 2003. It’s all relative. Nature 422: 383-384.
17.
Leebens-Mack, J., T. Vision, E. Brenner, J. E. Bowers, S. Cannon, M. J.
Clement, C. W. Cunningham, C. dePamphilis, R. deSalle, J. J. Doyle J. A. Eisen,
X. Gu, J. Harshman, E. A. Kellogg, E. V. Koonin, H. Philippe, J. C. Pires,
Y.-L. Qiu, S. Y. Rhee, K. Sjölander, D. E. Soltis, P. S. Soltis, P. Stevens, D.
W. Stevenson, T. Warnow, and C. Zmasek. 2006. Taking the first steps towards a
standard for reporting on phylogenies: minimal information about a phylogenetic
analysis (MIAPA). OMICS 10: 231-237.
18. Kellogg,
E. A. 2006. The difference between simple and compound leaves. Nature Genetics
38: 865-866.
19.
Kellogg, E. A. 2006. Beyond taxonomy: prospects for understanding morphological
diversity in the grasses (Poaceae). Darwiniana 44: 7-17.
20. Kellogg, E. A., and C. R. Buell. 2009. Editorial: Splendor in the
grasses. Plant Physiology 149: 1-3.
21. Brutnell, T. P., L. Wang, K. Swartwood, A.
Goldschmidt, D. Jackson, X.-G. Zhu, E. Kellogg, and J. Van Eck. 2010. Setaria viridis: a model for C4
photosynthesis. Plant Cell 22: 2537-2544.
22.
Galbraith, D. W., J. L. Bennetzen, E. A. Kellogg, J. C. Pires, and P. S.
Soltis. 2011. The genomes of all angiosperms: a call for a
coordinated global census. Journal of Botany 2011: Article ID 646198.
23.
Kellogg, E. A. 2012. Grasses, synteny, evolution, and molecular systematics.
pp. xxx-xxx in Encyclopedia of Genetics, ed. 2 Academic
Press.